Kourosh Jafari-Khouzani

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Publications

Journal Papers

 

Published

1. M. Najafi, H. Soltanian-Zadeh, K. Jafari-Khouzani, L. Scarpace, T. Mikkelsen, “Prediction of Glioblastoma Multiform Response to Bevacizumab Treatment Using Multi-Parametric MRI,” PLoS ONE, in press, 2011.

2. D. T. Barkmeier, A. K. Shah, D. Flanagan, M. D. Atkinson, R. Agarwal, D. R. Fuerst, K. Jafari-Khouzani, and J. A. Loeb, “High inter-reviewer variability of spike detection on intracranial EEG addressed by an automated multi-channel algorithm,” Clinical Neurophysiology, 2011, in press.

3. H. Bagher-Ebadian, K. Jafari-Khouzani, H. Soltanian-Zadeh, P. D. Mitsias, M. Chopp, and J. R. Ewing, “Predicting final extent of ischemic infarction using artificial neural network analysis of multi-parametric MRI in patients with stroke,” PLoS ONE, vol. 6(8):e22626, 2011.

4. M.-R. Nazem-Zadeh, K. Jafari-Khouzani, Q. Jiang, H. Soltanian-Zadeh, “Clustering method for estimating principal diffusion directions,” NeuroImage, vol. 57, no. 3, pp. 825-838, 2011.

5. C. Sidiropoulos, K. Jafari-Khouzani, H. Soltanian-Zadeh, P. Mitsias, P. Alexopoulos, T. Richter-Schmidinger, M. Reichel, P. Lewczuk, A. Doerfler, J. Kornhuber, “Influence of brain derived neurotrophic factor and apolipoprotein E genetic variants on hemispheric and lateral ventricular volume of young healthy adults,” Acta Neuropsychiatrica, vol. 23, no. 3, pp. 132–138, 2011.

6. R. Deeb, P. N. Malani, B. Gil, K. Jafari-Khouzani, H. Soltanian-Zadeh, S. Patel, and M. A. Zacharek, “A novel approach to stage chronic rhinosinusitis using 3-D volumetric measurements and advanced high resolution CT imaging,” American Journal of Rhinology and Allergy, in press, 2011.

7. K. Jafari-Khouzani, K. Elisevich, K. C. Karvelis, and H. Soltanian-Zadeh, “Quantitative multi-compartmental SPECT image analysis for lateralization of temporal lobe epilepsy,”  Epilepsy Research, vol. 19, no. 1-2, pp. 35-50, 2011.

8. K. Jafari-Khouzani, K. Elisevich, S. Patel, and H. Soltanian-Zadeh, “Database of magnetic resonance images of nonepileptic subjects and temporal lobe epilepsy patients for validation of hippocampal segmentation techniques,” Neuroinformatics, vol. 9, no. 4 , pp. 335-346, 2011.

9. A. Akhondi-Asl, K. Jafari-Khouzani, K. Elisevich, H. Soltanian-Zadeh, “Hippocampal volumetry for lateralization of temporal lobe epilepsy: automated versus manual methods,” NeuroImage, vol. 54 Suppl 1, pp. S218-26, 2011.

10. K. Jafari-Khouzani, K. Elisevich, S. Patel, B. Smith, and H. Soltanian-Zadeh, “FLAIR signal and texture analysis for lateralizing mesial temporal lobe epilepsy,” NeuroImage, vol. 49, pp. 1559–1571, 2010.

11. A. S. Arbab, B. Janic, K. Jafari-Khouzani, ASM Iskander, S. Kumar, N. R. Varma, R. A. Knight, H. Soltanian-Zadeh, S. L. Brown, J. A. Frank , “In vitro production of CTLs and imaging probes using cord blood cells: use them in cellular MRI to differentiate glioma from radiation injury in rats,” vol. 2, no.2, PLoS ONE, Feb. 2010.

12. K. Jafari-Khouzani, H. Soltanian-Zadeh, F. Fotouhi, J. R. Parrish, and R. L. Finley Jr., “Automated Segmentation and Classification of High Throughput Yeast Assay Spots,” IEEE Trans. Medical Imaging, vol. 26, no. 10, pp. 1401-1411, Oct. 2007. PDF

13. A. S. Arbab, A. M. Rad, ASM Iskander, K. Jafari-Khouzani, S. L. Brown, J. L. Churchman, G. Ding, Q. Jiang, J. R. Ewing, H. Soltanian-Zadeh, and D. J. Peck, “Magnetically Labeled Sensitized Splenocytes to Identify the Margin of Gliosarcoma by MRI: A Preliminary study, ” Magnetic Resonance in Medicine, 58(3), pp. 519-526, August 2007.

14. R. Farjam, H. Soltanian-Zadeh, K. Jafari-Khouzani, and R. A. Zoroofi, “An Image Analysis Approach for Automatic Malignancy Determination of Prostate Pathological Images,” Cytometry B Clin. Cytom., vol. 72, no. 4, pp. 227-240, July 2007.

15. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Radon Transform Orientation Estimation for Rotation Invariant Texture Analysis,” IEEE Trans. Pattern Analysis & Machine Intelligence, vol. 27, no. 6, pp. 1004-1008, June 2005. PDF

16. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Rotation-Invariant Multiresolution Texture Analysis Using Radon and Wavelet Transforms,” IEEE Trans. Image Processing, vol. 14, no. 6, pp. 783-795, June 2005. PDF

17. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Multiwavelet Grading of Pathological Images of Prostate,” IEEE Trans. Biomed. Eng., vol. 50, no. 6, pp. 607-704, May 2003. PDF

 

Submitted/Prepared

14. B. Janic, K. Jafari-Khouzani, A. Babajani-Feremi, A.S.M. Iskander, N. R. S Varma, R. A. Knight, M. M. Ali, and A. S. Arbab, “MRI Tracking of FePro Labeled Fresh and Cryopreserved Long Term in vitro Expanded Human Cord Blood AC133+ Endothelial Progenitor Cells in Rat Glioma,” submitted to PLoS ONE, 2011.

15. K. Jafari-Khouzani, K. Elisevich, and H. Soltanian-Zadeh, “Hippocampal shape anomalies contralateral to the seizure focus in mesial temporal lobe epilepsy,” prepared for submission to Brain, 2010.

16. H. Bagher-Ebadian, K. Jafari-Khouzani, H. Soltanian-Zadeh, and J. R. Ewing, “Blood circulatory model to estimate arterial input function in brain MR perfusion study,” prepared for submission to J. Magnetic Resonance in Medicine, 2010.

 

 

Conference  Papers

1. H. Bagher-Ebadian, K. Jafari-Khouzani, and H. Soltanian-Zadeh, “Quantitative study of kidney perfusion: Using an analytical model of blood circulatory system,” Society of Nuclear Medicine 57th Annual Meeting, vol. 51, pp. 1329-1329, 2010.

2. K. Elisevich, K. Jafari-Khouzani, K. Karvelis, and H. Soltanian-Zadeh, “Use of multicompartmental SPECT image analysis in temporal lobe epilepsy,” Epilepsia, vol. 15, pp. 47-47, 2010.

3. H. Bagher-Ebadian, K. Jafari-Khouzani, P. D. Mitsias, H. Soltanian-Zadeh, M. Chopp, and J. R. Ewing, “Predicting final extent of ischemic infarction using an artificial neural network analysis of multiparametric MRI in patients with stroke,” IJCNN, Piscataway, NJ, USA, 2009, pp. 229-35.

4. H. Bagher-Ebadian, K. Jafari-Khouzani, P. D. Mitsias, M. Chopp, and J. R. Ewing, “MRI measurement of ischemic brain penumbra using Kohonen’s multi-parametric self-organizing map (KMP-SOM) technique”, ISMRM, 2008.

5. A.M. Guo, P.A. Edwards, J.R. Falck, R.J. Roman, K. Jafari-Khouzani, and G.A. Scicli “Overexpression of CYP4A1-20-HETE in U251 glioma cell induces a hyperproliferative phenotype in vitro and rapidly growing tumors in vivo”, 10th Annual Winter Eicosanoid Conference; 2008 Mar 9–12; Baltimore, MD.

6. A.M. Guo, R.J. Roman, J.R. Falck, K. Jafari-Khouzani, P.A. Edwards, and G.M. Scicli “Overexpression of CYP4A1-20-HETE in U251 glioma cell induces hyperproliferative phenotypes in vitro and in vivo”, Experimental Biology Annual Meeting; 2008 Apr 5–9; San Diego, CA.

7. H. Bagher-Ebadian, K. Jafari-Khouzani, H. Soltanian-Zadeh, and J. R. Ewing, “A blood circulatory model to estimate the arterial input function in MR brain perfusion studies”, Scientific Meeting & Exhibition: International Society for Magnetic Resonance in Medicine, 2008.

8. S. Pourabdollah-Nejad, H. Bagher-Ebadian, Q. Jiang, D. C. Noll, D. C. Alexander, J. R. Ewing, K. Jafari-Khouzani, and M. Chopp, “Information extraction from ischemic stroke MR images using independent component analysis technique”, Scientific Meeting & Exhibition: International Society for Magnetic Resonance in Medicine, 2007.

9. M. Ghannad-Rezaie, K. Jafari-Khouzani, and H. Soltanian-Zadeh, "Recovery limitations of MEG source localization model for epilepsy," ISBI, Piscataway, NJ, USA, 2007, pp. 1088-91.

10. H. Bagher-Ebadian, J. R. Ewing, H. Soltanian-Zadeh, P. D. Mitsias, K. Jafari-Khouzani, and M. Chopp, “Predicting final infract size and pattern of 3-month lesion in MRI for patients with ischemic stroke: Using artificial neural network Technique,” ISMRM, 2007.

11. A. S. Arbab, A. M. Rad, ASM Iskander, K. Jafari-Khouzani, S. L. Brown, G. Ding, J. Quan, H. Soltanian-Zadeh, and D. J. Peck,  “Magnetically labeled sensitized splenocytes to identify glioma by MRI,” ISMRM, 2007.

12. K. Jafari-Khouzani, H. Soltanian-Zadeh, and K. Elisevich, “Hippocampus volume and texture analysis for temporal lobe epilepsy,” in Proc. IEEE Int. Conf. Electro/Information Technology, 2006, pp. 394-397, May 7-10.

13. M.-R. Siadat, K. Elisevich, H. Soltanian-Zadeh, K. Jafari-Khouzani, and S. Bowyer, “Subdural and depth electrode placement in the brain for validation of MEG in partial epilepsy,” in Proc. SPIE: Medical Imaging, 2006, Feb. 11-16, vol. 6141, pp. 676-683.

14. M. Ghannad-Rezaie, H. Soltanian-Zadeh, K. Jafari-Khouzani, M.R. Siadat, and R. A. Zoroofi, and K. Elisevich, “MRI-SPECT data fusion for temporal lobe epilepsy surgery candidate selection,” in Proc. 7th Int. Conf. IASTED: Signal and Image Processing, August 2005, pp. 128-132.

15. K. Jafari-Khouzani, H. Soltanian-Zadeh, R. Finley, and F. Fotouhi, “Neural network scoring of spots in X-Gal and –leu plates,” in Proc. IEEE NAFIPS Annual Conference on Soft Computing for Real World Applications, Ann Arbor, Michigan, June 2005, pp. 46-50.

16. R. Farjam, H. Soltanian-Zadeh, R. A. Zoroofi, and K. Jafari-Khouzani, “Tree-structured grading of pathological images of prostate,” in Proc. SPIE: Medical Imaging, 2005, vol. 5747, pp. 840-851.

17. K. Jafari-Khouzani, H. Soltanian-Zadeh, and K. Elisevich, “Texture analysis of high-resolution FLAIR images for TLE,” in Proc. SPIE: Medical Imaging, 2005, vol. 5747, pp. 1348-1355.

18. K. Jafari-Khouzani, H. Soltanian-Zadeh, and K. Elisevich, “MRI and SPECT fusion for epilepsy lateralization,” in Proc. SPIE: Medical Imaging, 2005, vol. 5746, pp. 662-669.

19. K. Jafari-Khouzani, H. Soltanian-Zadeh, K. Elisevich, and S. Patel, “Comparison of 2D and 3D wavelet features for TLE lateralization,” in Proc. SPIE: Medical Imaging, 2004, vol. 5369, no. 1, pp. 593-601.

20. K. Jafari-Khouzani, M.-R. Siadat, H. Soltanian-Zadeh, and K. Elisevich, “Texture analysis of hippocampus for epilepsy,” in Proc. SPIE: Medical Imaging, 2003, vol.  5031, pp.279-288.

21. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Multiwavelet Grading of Prostate Pathological Images,” in Proc. SPIE: Medical Imaging, 2002, vol. 4684 II, pp. 1130-1138.

22. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Automatic grading of pathological images of prostate using multiwavelet transform,” in Proc. 23rd Int. Conf. of the IEEE Engineering in Medicine and Biology, Istanbul, Turkey, vol. 3, pp. 2545-2548, 2001.

23. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Comparison of ordinary and fuzzy co-occurrence matrices for feature extraction for automatic grading of pathological images of prostate,” in Proc. 6th Iranian Conf. on Computer Eng., 2000.

24. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Automatic grading of pathological images of prostate using multiwavelet features,” in Proc. 1st Iranian Conf. on Machine Vision and Image Processing, 2001.

25. K. Jafari-Khouzani and H. Soltanian-Zadeh, “Several methods for automatic grading of pathological images of prostate,” in Proc. 9th Iranian conf. on Electrical Eng., 2001.

26. S. Safilian, K. Jafari-Khouzani, and C. Locus, “Localization of neuro-magnetic sources in brain, from MEG data using a combination of simulated annealing and genetic algorithm,” in Proc 9th Iranian Conf. on Biomedical Engineering, 1998.

 

Technical Reports

 

1. K. Jafari-Khouzani, H. Soltanian-Zadeh, “Radon Transform Orientation Estimation for Rotation Invariant Texture Analysis,” Technical Report TR-0105, Jan. 12, 2005. PDF